Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose-1-epimerase | SK85_04207 | P32139 | Negative | 4362070 - 4362972 | 33119.5 |
| glucosamine isomerase | SK85_04208 | P32140 | Negative | 4363041 - 4364282 | 47402.9 |
| aldolase | SK85_04209 | Q8X8D5 | Negative | 4364298 - 4365176 | 31998.8 |
| oxidoreductase with nad(p)-binding rossmann-fold | SK85_04210 | P0A9V8 | Negative | 4365200 - 4366096 | 31163.1 |
| ribokinase | SK85_04211 | P32143 | Positive | 4366264 - 4367160 | 31642.3 |
| transcriptional regulator | SK85_04212 | P32144 | Positive | 4367194 - 4367979 | 28509.0 |
| alpha-d-glucose-1-phosphate phosphatase yihx | SK85_04213 | P0A8Y3 | Positive | 4368078 - 4368677 | 22747.1 |
| inner membrane protein | SK85_04214 | A7ZU91 | Positive | 4368671 - 4369543 | 32840.7 |
| d-tyrosyl-trna(tyr) deacylase | SK85_04215 | A7ZU92 | Positive | 4369540 - 4369977 | 15951.0 |
| acetyltransferase | SK85_04216 | P0ADQ4 | Positive | 4370022 - 4370963 | 35339.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





