Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| impact family member yigz | SK85_04174 | P27862 | Positive | 4324465 - 4325079 | 21708.1 |
| trk system potassium uptake protein trkh | SK85_04175 | P0AFZ8 | Positive | 4325118 - 4326569 | 52962.9 |
| protoporphyrinogen ix dehydrogenase | SK85_04176 | P0ACB6 | Positive | 4326581 - 4327126 | 21257.5 |
| Trna-ile | Not Available | Not Available | Positive | 4328898 - 4328974 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 4329017 - 4329092 | Not Available |
| molybdopterin-guanine dinucleotide biosynthesis adapter protein | SK85_04182 | P32125 | Negative | 4332661 - 4333188 | 19364.5 |
| molybdenum cofactor guanylyltransferase | SK85_04183 | P32173 | Negative | 4333170 - 4333754 | 21586.1 |
| protein yihd | SK85_04184 | P0ADQ1 | Positive | 4333824 - 4334093 | 10273.5 |
| protein rdoa | SK85_04185 | Q8X8H9 | Positive | 4334170 - 4335156 | 38127.4 |
| thiol:disulfide interchange protein dsba | SK85_04186 | P0AEG5 | Positive | 4335173 - 4335799 | 23090.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





