Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | SK85_00074 | C4ZPZ7 | Negative | 85338 - 86909 | 57301.2 |
| hth-type transcriptional regulator leuo | SK85_00075 | P10151 | Positive | 87745 - 88689 | 35696.7 |
| acetolactate synthase isozyme 3 large subunit | SK85_00076 | P00893 | Positive | 89007 - 90731 | 62988.1 |
| acetolactate synthase isozyme 3 small subunit | SK85_00077 | P00894 | Positive | 90734 - 91225 | 17977.9 |
| catabolite repressor/activator | SK85_00078 | P0ACP3 | Positive | 91405 - 92409 | 38001.5 |
| protein mraz | SK85_00079 | P22186 | Positive | 93011 - 93469 | 17368.0 |
| ribosomal rna small subunit methyltransferase h | SK85_00080 | A7ZHH3 | Positive | 93471 - 94412 | 34879.9 |
| cell division protein ftsl | SK85_00081 | P0AEN6 | Positive | 94409 - 94774 | 13627.7 |
| peptidoglycan synthase ftsi | SK85_00082 | P0AD69 | Positive | 94790 - 96556 | 63881.2 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate-2, 6-diaminopimelate ligase | SK85_00083 | P22188 | Positive | 96543 - 98030 | 53334.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





