Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate phosphatase yigl | SK85_04154 | P27848 | Positive | 4302176 - 4302976 | 29709.4 |
| inner membrane protein | SK85_04155 | P0ADP6 | Positive | 4303052 - 4303951 | 33729.0 |
| hth-type transcriptional regulator metr | SK85_04156 | P0A9G0 | Negative | 4303839 - 4304792 | 35631.0 |
| 5-methyltetrahydropteroyltriglutamate- homocysteine methyltransferase | SK85_04157 | B1XAJ3 | Positive | 4305029 - 4307290 | 84678.1 |
| carboxymethylenebutenolidase | SK85_04158 | Q8X8L4 | Negative | 4307330 - 4308145 | 29396.8 |
| uridine phosphorylase | SK85_04159 | P12758 | Positive | 4308407 - 4309168 | 27151.7 |
| dna recombination protein rmuc | SK85_04160 | P0AG72 | Positive | 4309309 - 4310736 | 54767.6 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | SK85_04161 | A7ZU40 | Positive | 4310831 - 4311586 | 28074.8 |
| hypothetical protein | SK85_04162 | P0ADP7 | Positive | 4311600 - 4312205 | 22153.8 |
| 2-polyprenylphenol 6-hydroxylase | SK85_04163 | A7ZU42 | Positive | 4312202 - 4313842 | 63206.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





