Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium transporter cora | SK85_04144 | P0ABI6 | Positive | 4293402 - 4294352 | 36591.8 |
| inner membrane protein | SK85_04145 | P27842 | Negative | 4294395 - 4294775 | 14550.0 |
| inner membrane protein yigg | SK85_04146 | P27843 | Negative | 4294789 - 4295169 | 14409.0 |
| protein rard | SK85_04147 | P27844 | Negative | 4295264 - 4296154 | 33285.0 |
| hypothetical protein | SK85_04148 | P0ADP3 | Negative | 4296206 - 4296673 | 17163.8 |
| phospholipase a1 | SK85_04149 | P0A922 | Positive | 4296838 - 4297707 | 33164.9 |
| atp-dependent dna helicase recq | SK85_04150 | P15043 | Positive | 4297834 - 4299669 | 68580.9 |
| threonine efflux protein | SK85_04151 | P0AG39 | Positive | 4299733 - 4300353 | 22475.5 |
| homoserine/homoserine lactone efflux protein | SK85_04152 | P0AG36 | Negative | 4300415 - 4301035 | 22428.2 |
| lysophospholipase l2 | SK85_04153 | P59588 | Positive | 4301146 - 4302168 | 38980.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





