Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter yifk | SK85_04124 | P27837 | Positive | 4272842 - 4274227 | 50402.1 |
| Trna-arg | Not Available | Not Available | Positive | 4274330 - 4274406 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 4274465 - 4274540 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4274561 - 4274647 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 4274690 - 4274766 | Not Available |
| anaerobic sulfatase maturase | SK85_04129 | P25550 | Positive | 4274913 - 4276148 | 46621.8 |
| arylsulfatase | SK85_04130 | P25549 | Negative | 4276316 - 4277971 | 60715.0 |
| protein hemy | SK85_04131 | P0ACB9 | Negative | 4278650 - 4279846 | 45228.7 |
| uroporphyrinogen iii methylase | SK85_04132 | P09127 | Negative | 4279849 - 4281042 | 43273.7 |
| uroporphyrinogen-iii synthase | SK85_04133 | P09126 | Negative | 4281064 - 4281804 | 27813.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





