Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 2-epimerase | SK85_04114 | Q8XAR8 | Positive | 4262088 - 4263218 | 42220.0 |
| udp-n-acetyl-d-mannosamine dehydrogenase | SK85_04115 | P67066 | Positive | 4263215 - 4264477 | 45841.3 |
| dtdp-glucose 4,6-dehydratase 2 | SK85_04116 | P27830 | Positive | 4264477 - 4265544 | 39714.9 |
| glucose-1-phosphate thymidylyltransferase 2 | SK85_04117 | P61887 | Positive | 4265563 - 4266444 | 32736.3 |
| dtdp-fucosamine acetyltransferase | SK85_04118 | P27832 | Positive | 4266422 - 4267096 | 24221.7 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SK85_04119 | P27833 | Positive | 4267101 - 4268231 | 41903.4 |
| protein wzxe | SK85_04120 | P0AAA7 | Positive | 4268233 - 4269483 | 44962.3 |
| 4-alpha-l-fucosyltransferase | SK85_04121 | B1IWA7 | Positive | 4269480 - 4270559 | 40558.7 |
| common antigen polymerase wzye | SK85_04122 | B7M5E1 | Positive | 4270556 - 4271908 | 51492.1 |
| udp-n-acetyl-d-mannosaminuronic acid transferase | SK85_04123 | C4ZZ62 | Positive | 4271911 - 4272651 | 27929.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





