Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketol-acid reductoisomerase | SK85_04104 | C4ZZ44 | Positive | 4249967 - 4251442 | 54072.2 |
| peptidyl-prolyl cis-trans isomerase c | SK85_04105 | P0A9L7 | Negative | 4251488 - 4251769 | 10232.6 |
| hypothetical protein | SK85_04106 | P56259 | Negative | 4251968 - 4252417 | 16899.4 |
| atp-dependent dna helicase rep | SK85_04107 | P09980 | Positive | 4252634 - 4254655 | 77040.6 |
| guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SK85_04108 | A7ZTY0 | Negative | 4254702 - 4256186 | 54878.5 |
| atp-dependent rna helicase rhlb | SK85_04109 | A7ZTY2 | Negative | 4256320 - 4257585 | 47128.7 |
| thioredoxin-1 | SK85_04110 | P0AA27 | Positive | 4257716 - 4258045 | 11807.2 |
| transcription termination factor rho | SK85_04111 | P0AG32 | Positive | 4258372 - 4259631 | 47007.1 |
| undecaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | SK85_04112 | Q8XAS7 | Positive | 4259871 - 4260974 | 40931.6 |
| lipopolysaccharide biosynthesis protein wzze | SK85_04113 | P0AG01 | Positive | 4260986 - 4262032 | 39491.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





