Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribokinase | SK85_04082 | P0A9J7 | Positive | 4229774 - 4230703 | 32292.4 |
| ribose operon repressor | SK85_04083 | P0ACQ2 | Positive | 4230707 - 4231699 | 36614.1 |
| hypothetical protein | SK85_04084 | P31474 | Negative | 4231665 - 4232363 | 24868.1 |
| transposase insd for insertion element is2a/d/f/h/i/k | SK85_04085 | Not Available | Negative | 4232348 - 4233253 | 34486.0 |
| transposase insc for insertion element | SK85_04086 | Not Available | Negative | 4233211 - 4233576 | 13452.4 |
| hypothetical protein | SK85_04087 | Not Available | Negative | 4233652 - 4234428 | 28120.7 |
| transcriptional regulator | SK85_04088 | P31475 | Negative | 4234451 - 4235143 | 26077.5 |
| Trna-glu | Not Available | Not Available | Positive | 4237251 - 4237326 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 4238867 - 4238943 | Not Available |
| Trna-trp | Not Available | Not Available | Positive | 4238952 - 4239027 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





