Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein mioc | SK85_04072 | P03817 | Negative | 4218492 - 4218935 | 15882.6 |
| regulatory protein asnc | SK85_04073 | P0ACI8 | Negative | 4219025 - 4219483 | 16888.7 |
| aspartate-ammonia ligase | SK85_04074 | P63624 | Positive | 4219635 - 4220627 | 36780.8 |
| protein viaa | SK85_04075 | P0ADN1 | Negative | 4220632 - 4222083 | 55910.6 |
| atpase rava | SK85_04076 | C4ZZ24 | Negative | 4222077 - 4223573 | 56391.1 |
| potassium transport system protein kup | SK85_04077 | A7ZTV8 | Positive | 4223796 - 4225664 | 69298.3 |
| d-ribose pyranase | SK85_04078 | Q8XAW8 | Positive | 4225831 - 4226250 | 15293.4 |
| ribose import atp-binding protein rbsa | SK85_04079 | Q0TAW0 | Positive | 4226258 - 4227763 | 55045.0 |
| ribose transport system permease rbsc | SK85_04080 | P0AGI3 | Positive | 4227768 - 4228733 | 33454.0 |
| d-ribose-binding periplasmic protein | SK85_04081 | P02925 | Positive | 4228758 - 4229648 | 30940.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





