Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit beta | SK85_04062 | A7ZTU4 | Negative | 4208473 - 4209855 | 50328.5 |
| atp synthase gamma chain | SK85_04063 | B7UMJ8 | Negative | 4209882 - 4210745 | 31579.3 |
| atp synthase subunit alpha | SK85_04064 | A7ZTU6 | Negative | 4210796 - 4212337 | 55225.4 |
| atp synthase subunit delta | SK85_04065 | A7ZTU7 | Negative | 4212350 - 4212883 | 19333.3 |
| atp synthase subunit b | SK85_04066 | A7ZTU8 | Negative | 4212898 - 4213368 | 17264.9 |
| atp synthase subunit c | SK85_04067 | A8ACP3 | Negative | 4213430 - 4213669 | 8256.71 |
| atp synthase subunit a | SK85_04068 | A7ZTV0 | Negative | 4213716 - 4214531 | 30305.1 |
| atp synthase i | SK85_04069 | P0ABC1 | Negative | 4214540 - 4214920 | 13632.5 |
| ribosomal rna small subunit methyltransferase g | SK85_04070 | B7UMK5 | Negative | 4215537 - 4216160 | 23432.5 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme mnmg | SK85_04071 | A7ZTV2 | Negative | 4216224 - 4218113 | 69525.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





