Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, agza family, xanthine/uracil permease | SK85_04042 | P31466 | Negative | 4186440 - 4187777 | 46868.8 |
| 6-phosphogluconate phosphatase | SK85_04043 | P31467 | Positive | 4187942 - 4188607 | 24665.7 |
| inner membrane protein cbrb | SK85_04044 | P31468 | Positive | 4188674 - 4189141 | 16684.3 |
| hypothetical protein | SK85_04045 | P31469 | Positive | 4189190 - 4189777 | 22486.1 |
| 6-phosphogluconolactonase | SK85_04046 | P31470 | Negative | 4189839 - 4190561 | 26280.7 |
| enterochelin esterase | SK85_04047 | P31471 | Negative | 4190576 - 4191745 | 42757.2 |
| cryptic outer membrane porin bglh | SK85_04048 | B1X9U9 | Negative | 4191772 - 4193388 | 60674.2 |
| transposase | SK85_04049 | Not Available | Positive | 4193956 - 4194282 | 12644.0 |
| transposase | SK85_04050 | Not Available | Positive | 4194282 - 4195169 | 33679.1 |
| 6-phospho-beta-glucosidase bglb | SK85_04051 | P11988 | Negative | 4195051 - 4196181 | 42769.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





