Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l34 | SK85_04032 | A7ZTQ9 | Positive | 4175504 - 4175644 | 5380.74 |
| ribonuclease p protein component | SK85_04033 | A7ZTR0 | Positive | 4175694 - 4176020 | 12466.3 |
| membrane protein insertase yidc | SK85_04034 | C4ZYY3 | Positive | 4176244 - 4177890 | 61529.4 |
| trna modification gtpase mnme | SK85_04035 | B7M559 | Positive | 4177996 - 4179360 | 49233.8 |
| tryptophanase | SK85_04036 | A7ZTR3 | Positive | 4179898 - 4181313 | 52776.4 |
| tryptophan permease | SK85_04037 | P23173 | Positive | 4181404 - 4182651 | 45213.2 |
| multidrug resistance protein mdtl | SK85_04038 | B7L855 | Positive | 4182783 - 4183958 | 41492.2 |
| hth-type transcriptional regulator yidz | SK85_04039 | C4ZYY9 | Positive | 4183933 - 4184892 | 36883.9 |
| phosphopantetheinyl transferase | SK85_04040 | P0ADM9 | Positive | 4185049 - 4185798 | 27648.2 |
| chromate reductase, class i, flavoprotein | SK85_04041 | P0AGE7 | Positive | 4185820 - 4186386 | 20376.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





