Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | SK85_04022 | Q6BF16 | Negative | 4164163 - 4164780 | 21391.8 |
| 2-oxo-3-deoxygalactonate kinase | SK85_04023 | P31459 | Negative | 4164764 - 4165642 | 31375.4 |
| transcriptional regulator | SK85_04024 | P31460 | Negative | 4165639 - 4166328 | 26081.1 |
| lipoprotein | SK85_04025 | P0ADM6 | Positive | 4166606 - 4167262 | 24170.9 |
| sugar phosphatase yida | SK85_04026 | P0A8Y6 | Negative | 4167308 - 4168120 | 29722.8 |
| hypothetical protein | SK85_04027 | P09996 | Negative | 4168235 - 4168633 | 13845.4 |
| dna gyrase subunit b | SK85_04028 | P0AES7 | Negative | 4168873 - 4171287 | 89955.0 |
| dna replication and repair protein recf | SK85_04029 | A7ZTQ6 | Negative | 4171316 - 4172389 | 40516.4 |
| dna polymerase iii subunit beta | SK85_04030 | P0A990 | Negative | 4172389 - 4173489 | 40589.1 |
| chromosomal replication initiator protein dnaa | SK85_04031 | A7ZTQ8 | Negative | 4173494 - 4174897 | 52553.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





