Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotransferase enzyme iib component glvb | SK85_04012 | Q9AGA7 | Negative | 4153155 - 4154771 | 58380.2 |
| transcriptional regulator | SK85_04013 | P31453 | Positive | 4155067 - 4155783 | 27329.5 |
| hypothetical protein | SK85_04014 | A7ZTN8 | Negative | 4155780 - 4157441 | 58942.9 |
| small heat shock protein ibpb | SK85_04015 | A7ZTP0 | Negative | 4157637 - 4158065 | 16094.1 |
| small heat shock protein ibpa | SK85_04016 | A7ZTP1 | Negative | 4158177 - 4158590 | 15774.6 |
| outer membrane protein | SK85_04017 | P0ADM4 | Positive | 4158968 - 4159228 | 9326.99 |
| hypothetical protein | SK85_04018 | P31455 | Negative | 4159230 - 4160444 | 44986.6 |
| protein cbra | SK85_04019 | P31456 | Positive | 4160545 - 4161609 | 40144.6 |
| d-galactonate transporter | SK85_04020 | P0AA77 | Negative | 4161606 - 4162898 | 47079.4 |
| d-galactonate dehydratase | SK85_04021 | B1LL17 | Negative | 4163018 - 4164166 | 42525.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





