Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine/uracil permase | SK85_03992 | P31440 | Negative | 4133624 - 4134958 | 46936.5 |
| adenine deaminase | SK85_03993 | C4ZXQ7 | Positive | 4135133 - 4136899 | 63715.1 |
| hexose phosphate transporter | SK85_03994 | P0AGC1 | Negative | 4136945 - 4138336 | 50609.6 |
| regulatory protein uhpc | SK85_03995 | P09836 | Negative | 4138474 - 4139793 | 48259.4 |
| sensor protein uhpb | SK85_03996 | P09835 | Negative | 4139803 - 4141305 | 56309.3 |
| transcriptional regulatory protein uhpa | SK85_03997 | P0AGA8 | Negative | 4141305 - 4141895 | 20890.6 |
| acetolactate synthase isozyme 1 small subunit | SK85_03998 | P0ADG0 | Negative | 4141971 - 4142261 | 11106.4 |
| acetolactate synthase isozyme 1 large subunit | SK85_03999 | P08142 | Negative | 4142265 - 4143953 | 60444.2 |
| hypothetical protein | SK85_04000 | Not Available | Positive | 4144722 - 4144811 | 3222.32 |
| multidrug resistance protein d | SK85_04001 | P31442 | Positive | 4145091 - 4146275 | 42192.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





