Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_03982 | P31433 | Positive | 4121626 - 4123335 | 62280.9 |
| alpha-xylosidase | SK85_03983 | P31434 | Negative | 4123388 - 4125706 | 88084.0 |
| inner membrane symporter yicj | SK85_03984 | P31435 | Negative | 4125716 - 4127098 | 50951.4 |
| Trna-sec(p) | Not Available | Not Available | Positive | 4127391 - 4127481 | Not Available |
| sugar efflux transporter c | SK85_03986 | P31436 | Positive | 4128122 - 4129306 | 43466.0 |
| inner membrane protein | SK85_03987 | P31437 | Positive | 4129417 - 4130340 | 33114.5 |
| lipoprotein 28 | SK85_03988 | P04846 | Negative | 4130344 - 4131162 | 29455.3 |
| hypothetical protein | SK85_03989 | Q2M7X4 | Positive | 4131384 - 4131677 | 11070.3 |
| purine ribonucleoside efflux pump nepi | SK85_03990 | C4ZXQ4 | Negative | 4131718 - 4132956 | 43628.7 |
| hypothetical protein | SK85_03991 | P0ADL5 | Negative | 4133119 - 4133571 | 17220.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





