Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-damage-inducible protein | SK85_03972 | P23840 | Positive | 4108928 - 4109752 | 31079.9 |
| inner membrane protein | SK85_03973 | P0AGM3 | Positive | 4110043 - 4110660 | 22049.8 |
| dna ligase b | SK85_03974 | C4ZXN9 | Negative | 4110657 - 4112339 | 63182.8 |
| guanylate kinase | SK85_03975 | Q0TBG1 | Positive | 4112597 - 4113220 | 23594.1 |
| dna-directed rna polymerase subunit omega | SK85_03976 | A8ARN6 | Positive | 4113275 - 4113550 | 10237.2 |
| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | SK85_03977 | P0AG25 | Positive | 4113569 - 4115677 | 79347.1 |
| trna (guanosine(18)-2'-o)-methyltransferase | SK85_03978 | P0AGJ3 | Positive | 4115684 - 4116373 | 25359.6 |
| atp-dependent dna helicase recg | SK85_03979 | P24230 | Positive | 4116379 - 4118460 | 76435.1 |
| sodium/glutamate symporter carrier protein | SK85_03980 | P0AER8 | Negative | 4118629 - 4119834 | 42427.9 |
| xanthine permease xanp | SK85_03981 | P0AGN1 | Positive | 4120114 - 4121505 | 48871.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





