Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative transposase orfb | SK85_00302 | Not Available | Positive | 318138 - 319025 | 33679.1 |
| Attr | Not Available | Not Available | Positive | 328360 - 328371 | Not Available |
| Ea59 protein | SK85_00321 | P03754 | Positive | 341389 - 342966 | 59482.4 |
| Ea31 | SK85_00322 | P03753 | Positive | 342963 - 343853 | 34585.5 |
| hypothetical protein | SK85_00323 | Not Available | Negative | 344209 - 344460 | 9494.69 |
| Is3 transposase b | SK85_00324 | Not Available | Negative | 344522 - 345388 | 33542.2 |
| Is3 transposase a | SK85_00325 | Not Available | Negative | 345385 - 345684 | 11543.8 |
| Chaperone of endosialidase | SK85_00326 | Not Available | Negative | 345768 - 346472 | 26206.7 |
| Hypothetical protein | SK85_00327 | Not Available | Negative | 346482 - 346763 | 10683.6 |
| Tail fiber protein | SK85_00328 | P76072 | Negative | 346760 - 349108 | 81961.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





