Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_03922 | Q8X2T9 | Positive | 4060633 - 4060950 | 11859.4 |
| inner membrane protein yibh | SK85_03923 | P0AFV1 | Negative | 4061410 - 4062546 | 41990.8 |
| inner membrane protein yiaw | SK85_03924 | P32108 | Negative | 4062549 - 4062911 | 13866.8 |
| pts system mannitol-specific eiicba component | SK85_03925 | P00550 | Positive | 4063448 - 4065361 | 67976.5 |
| mannitol-1-phosphate 5-dehydrogenase | SK85_03926 | B7N242 | Positive | 4065591 - 4066739 | 41126.4 |
| mannitol operon repressor | SK85_03927 | P0AF11 | Positive | 4066739 - 4067326 | 21991.4 |
| hypothetical protein | SK85_03928 | Not Available | Negative | 4067338 - 4067547 | 7995.76 |
| ribosome-associated protein | SK85_03929 | P0ADL0 | Positive | 4067832 - 4068194 | 13696.8 |
| l-lactate permease | SK85_03930 | P33231 | Positive | 4068566 - 4070221 | 59171.5 |
| dna-binding transcriptional repressor | SK85_03931 | P0ACL7 | Positive | 4070221 - 4070997 | 29167.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





