Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylate/hydroxypyruvate reductase b | SK85_03872 | C4ZXE2 | Positive | 4006664 - 4007638 | 35397.5 |
| hypothetical protein | SK85_03873 | P0ADK2 | Negative | 4007688 - 4008398 | 25664.5 |
| transcriptional regulator | SK85_03874 | P0A9V7 | Positive | 4008832 - 4009122 | 11033.5 |
| cold shock protein cspa | SK85_03875 | P0A9Y1 | Positive | 4009403 - 4009615 | 7403.66 |
| protein hoka | SK85_03876 | P37305 | Negative | 4009802 - 4009954 | 5998.6 |
| transposase | SK85_03877 | P19768 | Positive | 4010034 - 4010555 | 19726.2 |
| transposase | SK85_03878 | P19769 | Positive | 4010552 - 4011403 | 33479.4 |
| glycine-trna ligase beta subunit | SK85_03879 | C4ZXE9 | Negative | 4011682 - 4013751 | 76817.2 |
| glycine-trna ligase alpha subunit | SK85_03880 | A8ARE6 | Negative | 4013761 - 4014672 | 34718.2 |
| hypothetical protein | SK85_03881 | Q2M7M3 | Negative | 4014767 - 4015066 | 11336.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





