Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide transport system permease dppb | SK85_03862 | P0AEG0 | Negative | 3994293 - 3995312 | 37499.4 |
| periplasmic dipeptide transporter | SK85_03863 | P23847 | Negative | 3995620 - 3997227 | 60296.8 |
| Trna-pro | Not Available | Not Available | Positive | 3997970 - 3998046 | Not Available |
| phosphoethanolamine transferase eptb | SK85_03865 | P37661 | Negative | 3998138 - 3999829 | 63807.9 |
| mfs transporter, ofa family, oxalate/formate antiporter | SK85_03866 | P37662 | Negative | 4000153 - 4001361 | 42953.4 |
| hypothetical protein | SK85_03867 | P37663 | Negative | 4001590 - 4002288 | 25952.1 |
| dna-3-methyladenine glycosylase 1 | SK85_03868 | P05100 | Positive | 4002446 - 4003009 | 21101.2 |
| acyltransferase | SK85_03869 | P37664 | Positive | 4003006 - 4003446 | 17104.8 |
| biotin sulfoxide reductase | SK85_03870 | P20099 | Negative | 4003415 - 4005748 | 85855.3 |
| outer membrane lipoprotein | SK85_03871 | P37665 | Positive | 4005901 - 4006560 | 22212.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





