Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione-regulated potassium-efflux system protein kefc | SK85_00047 | C4ZPX3 | Positive | 51189 - 53051 | 67800.1 |
| dihydrofolate reductase | SK85_00048 | P0ABQ5 | Positive | 53132 - 53722 | 22301.4 |
| bis(5'-nucleosyl)-tetraphosphatase, symmetrical | SK85_00049 | B7L4H2 | Negative | 53800 - 54642 | 31298.4 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 54682 - 56211 | Not Available |
| protein apag | SK85_00050 | A7ZHE3 | Negative | 54649 - 55026 | 13867.6 |
| ribosomal rna small subunit methyltransferase a | SK85_00051 | B7NHF7 | Negative | 55029 - 55850 | 30422.0 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 56573 - 59368 | Not Available |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SK85_00052 | C4ZPX8 | Negative | 55847 - 56836 | 35115.9 |
| chaperone sura | SK85_00053 | P0ABZ8 | Negative | 56836 - 58122 | 47286.5 |
| lps-assembly protein lptd | SK85_00054 | P31554 | Negative | 58175 - 60529 | 89675.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





