Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cellulose biosynthesis protein bcsq | SK85_03852 | P0DP92 | Negative | 3984755 - 3985507 | 27879.4 |
| hypothetical protein | SK85_03853 | P0ADJ3 | Negative | 3985519 - 3985707 | 7018.28 |
| cellulose biosynthesis protein bcse | SK85_03854 | P37657 | Positive | 3985992 - 3987551 | 58975.9 |
| celllulose biosynthesis operon protein bcsf/yhjt | SK85_03855 | P0ADJ6 | Positive | 3987548 - 3987739 | 7364.39 |
| cellulose synthase operon protein yhju | SK85_03856 | P37659 | Positive | 3987736 - 3989415 | 62035.3 |
| small toxic polypeptide ldrd | SK85_03857 | Q6BF25 | Negative | 3989502 - 3989609 | 3916.94 |
| inner membrane transporter yhjv | SK85_03858 | P37660 | Positive | 3990085 - 3991356 | 47260.3 |
| dipeptide transport atp-binding protein dppf | SK85_03859 | P37313 | Negative | 3991386 - 3992390 | 37562.7 |
| dipeptide transport atp-binding protein dppd | SK85_03860 | P0AAG1 | Negative | 3992387 - 3993370 | 35846.5 |
| dipeptide transport system permease dppc | SK85_03861 | P0AEG3 | Negative | 3993381 - 3994283 | 32310.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





