Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane biogenesis protein | SK85_03842 | P37645 | Negative | 3965812 - 3967872 | 74461.8 |
| cyclic di-gmp phosphodiesterase yhjh | SK85_03843 | P37646 | Negative | 3967942 - 3968709 | 29602.9 |
| 2-dehydro-3-deoxygluconokinase | SK85_03844 | P37647 | Positive | 3968941 - 3969870 | 34022.2 |
| protein yhjj | SK85_03845 | P37648 | Negative | 3969966 - 3971462 | 55530.5 |
| c4-dicarboxylate transporter | SK85_03846 | A7ZT69 | Negative | 3971683 - 3972969 | 45439.2 |
| protein yhjk | SK85_03847 | P37649 | Negative | 3973152 - 3975101 | 72829.8 |
| cellulose synthase operon protein c | SK85_03848 | P37650 | Negative | 3975222 - 3978695 | 127759.0 |
| endoglucanase | SK85_03849 | P37651 | Negative | 3978677 - 3979783 | 41702.4 |
| cyclic di-gmp-binding protein | SK85_03850 | P37652 | Negative | 3979790 - 3982093 | 84665.8 |
| cellulose synthase catalytic subunit | SK85_03851 | P37653 | Negative | 3982140 - 3984758 | 99790.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





