Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein slp | SK85_03822 | P37194 | Positive | 3943483 - 3944049 | 20949.1 |
| hth-type transcriptional regulator dctr | SK85_03823 | P37195 | Positive | 3944205 - 3944735 | 20409.5 |
| mg(2+) transport atpase inner membrane protein | SK85_03824 | P0AFV3 | Negative | 3944777 - 3945352 | 20640.6 |
| acid stress chaperone hdeb | SK85_03825 | P0AET3 | Negative | 3945488 - 3945826 | 12523.1 |
| acid stress chaperone hdea | SK85_03826 | P0AET0 | Negative | 3945930 - 3946262 | 11858.2 |
| protein hded | SK85_03827 | P0AET6 | Positive | 3946517 - 3947089 | 20904.6 |
| transcriptional regulator gade | SK85_03828 | P63206 | Positive | 3947888 - 3948415 | 20600.6 |
| hypothetical protein | SK85_03829 | Not Available | Negative | 3948416 - 3948694 | 9789.79 |
| multidrug resistance protein mdte | SK85_03830 | P37636 | Positive | 3948754 - 3949911 | 41193.0 |
| multidrug resistance protein mdtf | SK85_03831 | P37637 | Positive | 3949936 - 3953049 | 111623.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





