Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide and tripeptide permease b | SK85_03812 | P36837 | Positive | 3931583 - 3933052 | 53578.4 |
| ribosomal rna small subunit methyltransferase j | SK85_03813 | P68568 | Negative | 3933101 - 3933853 | 26950.8 |
| oligopeptidase a | SK85_03814 | P27298 | Negative | 3933861 - 3935903 | 77171.3 |
| ribosomal rna large subunit methyltransferase j | SK85_03815 | P37634 | Positive | 3936106 - 3936948 | 31943.6 |
| glutathione reductase | SK85_03816 | P06715 | Positive | 3937020 - 3938372 | 48745.3 |
| hypothetical protein | SK85_03817 | Not Available | Positive | 3938537 - 3938710 | 6134.05 |
| arsenical resistance operon repressor | SK85_03818 | P37309 | Positive | 3939249 - 3939602 | 13253.3 |
| arsenical pump membrane protein | SK85_03819 | P0AB94 | Positive | 3939656 - 3940945 | 45500.2 |
| arsenate reductase | SK85_03820 | P0AB96 | Positive | 3940958 - 3941383 | 15854.2 |
| hypothetical protein | SK85_03821 | P37635 | Positive | 3942012 - 3943235 | 47063.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





