Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yhhq | SK85_03782 | P37619 | Positive | 3897290 - 3897955 | 25270.3 |
| protein dcrb | SK85_03783 | P0AEE1 | Positive | 3898028 - 3898585 | 19788.7 |
| major facilitator superfamily transporter | SK85_03784 | P37621 | Negative | 3898589 - 3899839 | 43427.9 |
| inner membrane protein | SK85_03785 | P0AGM1 | Positive | 3899938 - 3900987 | 38524.8 |
| 4'-phosphopantetheinyl transferase acpt | SK85_03786 | P37623 | Positive | 3901042 - 3901629 | 21769.0 |
| nickel-binding periplasmic protein | SK85_03787 | P33590 | Positive | 3901740 - 3903314 | 58722.1 |
| nickel transport system permease nikb | SK85_03788 | P33591 | Positive | 3903314 - 3904258 | 35250.3 |
| nickel transport system permease nikc | SK85_03789 | P0AFB0 | Positive | 3904255 - 3905088 | 30363.8 |
| nickel import atp-binding protein nikd | SK85_03790 | P33593 | Positive | 3905088 - 3905852 | 26822.1 |
| nickel import atp-binding protein nike | SK85_03791 | P33594 | Positive | 3905849 - 3906655 | 29723.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





