Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpoh | SK85_03772 | P0AGB5 | Negative | 3888002 - 3888856 | 32470.6 |
| cell division protein ftsx | SK85_03773 | P0AC31 | Negative | 3889101 - 3890159 | 38545.9 |
| cell division atp-binding protein ftse | SK85_03774 | P0A9R9 | Negative | 3890152 - 3890820 | 24440.8 |
| signal recognition particle receptor ftsy | SK85_03775 | P10121 | Negative | 3890823 - 3892316 | 54516.3 |
| ribosomal rna small subunit methyltransferase d | SK85_03776 | P0ADY0 | Positive | 3892466 - 3893062 | 21678.8 |
| inner membrane protein | SK85_03777 | P37614 | Positive | 3893052 - 3893321 | 10252.4 |
| hypothetical protein | SK85_03778 | P37615 | Negative | 3893324 - 3893683 | 13497.3 |
| inner membrane protein | SK85_03779 | P0ADJ1 | Positive | 3893824 - 3894450 | 23791.9 |
| lead, cadmium, zinc and mercury-transporting atpase | SK85_03780 | P37617 | Positive | 3894524 - 3896722 | 76844.4 |
| sulfurtransferase tusa | SK85_03781 | A7ZT06 | Negative | 3896824 - 3897069 | 9095.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





