Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonobetaine coa ligase:carnitine coa ligase | SK85_00037 | A7ZVY7 | Negative | 39690 - 41243 | 58520.3 |
| crotonobetainyl-coa:carnitine coa-transferase | SK85_00038 | C4ZPW4 | Negative | 41317 - 42534 | 45101.2 |
| crotonobetainyl-coa dehydrogenase | SK85_00039 | A7ZHD0 | Negative | 42663 - 43805 | 42560.8 |
| l-carnitine/gamma-butyrobetaine antiporter | SK85_00040 | A7ZHD1 | Negative | 43836 - 45350 | 56590.4 |
| protein fixa | SK85_00041 | A7ZHD4 | Positive | 45823 - 46593 | 27145.2 |
| protein fixb | SK85_00042 | C4ZPW8 | Positive | 46608 - 47549 | 33515.1 |
| protein fixc | SK85_00043 | P68645 | Positive | 47600 - 48886 | 45705.6 |
| ferredoxin-like protein fixx | SK85_00044 | P68648 | Positive | 48883 - 49170 | 10479.5 |
| metabolite transporter yaau | SK85_00045 | P31679 | Positive | 49227 - 50558 | 48669.8 |
| glutathione-regulated potassium-efflux system ancillary protein keff | SK85_00046 | A7ZHD9 | Positive | 50666 - 51196 | 20171.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





