Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quercetin 2,3-dioxygenase | SK85_03752 | P46852 | Negative | 3867802 - 3868497 | 26280.8 |
| oxidoreductase with nad(p)-binding rossmann-fold | SK85_03753 | P46853 | Negative | 3868620 - 3869657 | 38767.1 |
| acetyltransferase | SK85_03754 | P46854 | Positive | 3869990 - 3870478 | 18794.6 |
| hypothetical protein | SK85_03755 | Not Available | Positive | 3870715 - 3871893 | 44233.9 |
| hypothetical protein | SK85_03756 | P46856 | Positive | 3871890 - 3872384 | 19066.6 |
| hypothetical protein | SK85_03757 | P46857 | Positive | 3872834 - 3873118 | 10643.4 |
| gamma-glutamyltranspeptidase | SK85_03758 | P18956 | Negative | 3873156 - 3874898 | 61771.4 |
| hypothetical protein | SK85_03759 | P0ADX7 | Positive | 3875018 - 3875458 | 16624.9 |
| glycerophosphoryl diester phosphodiesterase | SK85_03760 | P10908 | Negative | 3875445 - 3876188 | 27395.1 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | SK85_03761 | P10907 | Negative | 3876185 - 3877255 | 39526.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





