Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maltodextrin phosphorylase | SK85_03732 | P00490 | Negative | 3838931 - 3841324 | 90527.3 |
| hth-type transcriptional regulator malt | SK85_03733 | C4ZVX0 | Positive | 3841936 - 3844641 | 103124.0 |
| rna 3'-terminal phosphate cyclase | SK85_03734 | C4ZVX1 | Negative | 3844684 - 3845700 | 35852.4 |
| rna-splicing ligase rtcb | SK85_03735 | P46850 | Negative | 3845704 - 3846930 | 45224.3 |
| sigma 54-dependent transcriptional regulator for rtcba expression | SK85_03736 | P38035 | Positive | 3847119 - 3848717 | 60336.6 |
| glycerol-3-phosphate regulon repressor | SK85_03737 | P0ACL0 | Negative | 3848699 - 3849457 | 28049.6 |
| rhomboid protease glpg | SK85_03738 | B7UKC8 | Negative | 3849474 - 3850304 | 31308.5 |
| thiosulfate sulfurtransferase glpe | SK85_03739 | A7ZSV5 | Negative | 3850349 - 3850675 | 12083.1 |
| aerobic glycerol-3-phosphate dehydrogenase | SK85_03740 | P13035 | Positive | 3850865 - 3852370 | 56753.7 |
| hypothetical protein | SK85_03741 | P76692 | Negative | 3852576 - 3852857 | 10130.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





