Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yhgf | SK85_03722 | P46837 | Positive | 3826236 - 3828557 | 85076.6 |
| ferrous iron transporter a | SK85_03723 | P0AEL5 | Positive | 3829014 - 3829241 | 8371.31 |
| ferrous iron transporter b | SK85_03724 | P33650 | Positive | 3829258 - 3831579 | 84478.7 |
| ferrous iron transporter c | SK85_03725 | B7L4U0 | Positive | 3831579 - 3831815 | 8660.66 |
| transposase | SK85_03726 | P31667 | Positive | 3832018 - 3832896 | 33269.4 |
| pimeloyl-[acyl-carrier protein] methyl esterase | SK85_03727 | C4ZUR7 | Negative | 3832925 - 3833695 | 28506.6 |
| protein gntx | SK85_03728 | P46846 | Positive | 3833733 - 3834416 | 25727.7 |
| fe/s biogenesis protein nfua | SK85_03729 | A7ZSU3 | Positive | 3834475 - 3835050 | 20998.9 |
| high-affinity gluconate transporter | SK85_03730 | P39835 | Positive | 3835410 - 3836726 | 45969.6 |
| 4-alpha-glucanotransferase | SK85_03731 | P15977 | Negative | 3836837 - 3838921 | 78519.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





