Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp compounds hydrolase nude | SK85_03712 | P45799 | Negative | 3814440 - 3815000 | 21154.4 |
| inner membrane protein | SK85_03713 | P45800 | Positive | 3815332 - 3817455 | 79093.9 |
| gmp/imp nucleotidase yrfg | SK85_03714 | P64636 | Positive | 3817520 - 3818188 | 25400.2 |
| heat shock protein 15 | SK85_03715 | P0ACH0 | Positive | 3818199 - 3818600 | 15496.7 |
| chaperonin | SK85_03716 | B7UKA5 | Positive | 3818625 - 3819503 | 32536.3 |
| inner membrane protein | SK85_03717 | P45804 | Negative | 3819566 - 3821290 | 64641.0 |
| phosphoenolpyruvate carboxykinase | SK85_03718 | B7UKA7 | Positive | 3821669 - 3823291 | 59646.7 |
| osmolarity sensor protein envz | SK85_03719 | P0AEJ4 | Negative | 3823367 - 3824719 | 50337.1 |
| transcriptional regulatory protein ompr | SK85_03720 | P0AA18 | Negative | 3824716 - 3825435 | 27355.3 |
| transcription elongation factor greb | SK85_03721 | P30128 | Positive | 3825663 - 3826139 | 18528.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





