Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite reductase (nadh) small subunit | SK85_03682 | P0A9I9 | Positive | 3785402 - 3785728 | 12284.7 |
| nitrite transporter nirc | SK85_03683 | P0AC26 | Positive | 3785854 - 3786660 | 28564.1 |
| siroheme synthase | SK85_03684 | B7L4P2 | Positive | 3786679 - 3788052 | 49954.4 |
| hypothetical protein | SK85_03685 | P64629 | Positive | 3788299 - 3788466 | 5819.16 |
| fructoselysine transporter | SK85_03686 | P45539 | Positive | 3788761 - 3790098 | 47611.3 |
| fructoselysine 6-phosphate deglycase | SK85_03687 | P0AC00 | Positive | 3790119 - 3791141 | 38571.3 |
| protein frlc | SK85_03688 | P45541 | Positive | 3791191 - 3792021 | 31170.7 |
| fructoselysine kinase | SK85_03689 | P45543 | Positive | 3792018 - 3792803 | 28333.3 |
| hth-type transcriptional regulator frlr | SK85_03690 | P45544 | Positive | 3792903 - 3793634 | 27822.2 |
| hypothetical protein | SK85_03691 | P45545 | Negative | 3793786 - 3794871 | 38601.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





