Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | SK85_03662 | P45523 | Negative | 3765458 - 3766270 | 28883.4 |
| protein slyx | SK85_03663 | B7UK58 | Positive | 3766491 - 3766709 | 8214.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | SK85_03664 | P0A9L1 | Negative | 3766758 - 3767348 | 20854.1 |
| hypothetical protein | SK85_03665 | P0ADX0 | Negative | 3767443 - 3767643 | 7599.17 |
| glutathione-regulated potassium-efflux system protein kefb | SK85_03666 | C4ZUK6 | Negative | 3767653 - 3769458 | 66415.3 |
| glutathione-regulated potassium-efflux system ancillary protein kefg | SK85_03667 | A7ZSM7 | Negative | 3769458 - 3770009 | 20827.9 |
| abc transporter atp-binding protein | SK85_03668 | P63390 | Positive | 3770140 - 3772053 | 71847.6 |
| hydrolase | SK85_03669 | P45524 | Positive | 3772053 - 3773075 | 38497.4 |
| hypothetical protein | SK85_03670 | A7ZSN0 | Positive | 3773069 - 3773287 | 8470.04 |
| phosphoribulokinase | SK85_03671 | P0AEX5 | Positive | 3773341 - 3774210 | 32345.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





