Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l24 | SK85_03622 | A7MPH5 | Negative | 3734991 - 3735305 | 11316.9 |
| 50s ribosomal protein l14 | SK85_03623 | A7ZSJ9 | Negative | 3735316 - 3735687 | 13541.9 |
| 30s ribosomal protein s17 | SK85_03624 | A7MPH2 | Negative | 3735852 - 3736106 | 9705.01 |
| 50s ribosomal protein l29 | SK85_03625 | A7ZSK1 | Negative | 3736106 - 3736297 | 7273.91 |
| 50s ribosomal protein l16 | SK85_03626 | A8AQK9 | Negative | 3736297 - 3736707 | 15282.1 |
| 30s ribosomal protein s3 | SK85_03627 | A8AQL0 | Negative | 3736720 - 3737421 | 25984.8 |
| 50s ribosomal protein l22 | SK85_03628 | A8AQL2 | Negative | 3737439 - 3737771 | 12227.0 |
| 30s ribosomal protein s19 | SK85_03629 | A8AQL3 | Negative | 3737786 - 3738064 | 10430.9 |
| 50s ribosomal protein l2 | SK85_03630 | A7ZSK6 | Negative | 3738081 - 3738902 | 29862.3 |
| 50s ribosomal protein l23 | SK85_03631 | P0ADZ2 | Negative | 3738920 - 3739222 | 11199.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





