Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l36 | SK85_03612 | A7MPF5 | Negative | 3730156 - 3730272 | 4364.59 |
| protein translocase subunit secy | SK85_03613 | P0AGA4 | Negative | 3730304 - 3731635 | 48514.7 |
| 50s ribosomal protein l15 | SK85_03614 | C4ZUF6 | Negative | 3731643 - 3732077 | 14996.4 |
| 50s ribosomal protein l30 | SK85_03615 | A7ZSJ1 | Negative | 3732081 - 3732260 | 6542.23 |
| 30s ribosomal protein s5 | SK85_03616 | A8AQJ8 | Negative | 3732264 - 3732767 | 17604.5 |
| 50s ribosomal protein l18 | SK85_03617 | A8AQJ9 | Negative | 3732782 - 3733135 | 12770.4 |
| 50s ribosomal protein l6 | SK85_03618 | A7ZSJ4 | Negative | 3733145 - 3733678 | 18904.9 |
| 30s ribosomal protein s8 | SK85_03619 | A8AQK2 | Negative | 3733691 - 3734083 | 14127.4 |
| 30s ribosomal protein s14 | SK85_03620 | A7ZSJ6 | Negative | 3734117 - 3734422 | 11581.1 |
| 50s ribosomal protein l5 | SK85_03621 | A7ZSJ7 | Negative | 3734437 - 3734976 | 20302.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





