Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin carboxylase | SK85_03568 | P24182 | Positive | 3693158 - 3694507 | 49323.7 |
| inner membrane protein | SK85_03569 | P45566 | Positive | 3694616 - 3694858 | 9098.24 |
| sodium/pantothenate symporter | SK85_03570 | P16256 | Positive | 3694848 - 3696299 | 51720.3 |
| ribosomal protein l11 methyltransferase | SK85_03571 | A7ZSF3 | Positive | 3696311 - 3697192 | 31878.8 |
| trna-dihydrouridine synthase b | SK85_03572 | P0ABT7 | Positive | 3697614 - 3698486 | 32230.6 |
| dna-binding protein fis | SK85_03573 | A8AQG0 | Positive | 3698512 - 3698808 | 11240.6 |
| dna adenine methyltransferase yhdj | SK85_03574 | P28638 | Positive | 3698894 - 3699778 | 33399.3 |
| membrane protein | SK85_03575 | P64621 | Positive | 3699862 - 3700041 | 7203.93 |
| dna-binding transcriptional regulator | SK85_03576 | P0ACT3 | Negative | 3700044 - 3700706 | 25199.7 |
| multidrug export protein acre | SK85_03577 | P24180 | Positive | 3701105 - 3702262 | 41320.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





