Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na(+)/h(+) antiporter nhaa | SK85_00018 | Q8XA63 | Positive | 17489 - 18655 | 41376.3 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 18169 - 18283 | Not Available |
| transcriptional activator protein nhar | SK85_00019 | P0A9G2 | Positive | 18721 - 19620 | 34040.0 |
| hypothetical protein | SK85_00020 | Not Available | Negative | 19658 - 20617 | 35990.4 |
| hypothetical protein | SK85_00021 | P33341 | Negative | 20630 - 21775 | 43206.6 |
| hypothetical protein | SK85_00022 | Not Available | Negative | 22208 - 22864 | 25389.6 |
| hypothetical protein | SK85_00023 | Not Available | Negative | 23239 - 23628 | 15558.8 |
| 30s ribosomal protein s20 | SK85_00024 | A7ZHB2 | Negative | 24111 - 24374 | 9684.94 |
| riboflavin biosynthesis protein ribf | SK85_00025 | P0AG42 | Positive | 24703 - 25644 | 34736.4 |
| isoleucine-trna ligase | SK85_00026 | A7ZHB5 | Positive | 25687 - 28503 | 104300.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





