Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-binding protein | SK85_03518 | A7ZSA4 | Positive | 3634702 - 3635556 | 32494.2 |
| phosphocarrier protein npr | SK85_03519 | P0A9N2 | Positive | 3635553 - 3635825 | 9810.71 |
| hypothetical protein | SK85_03520 | P64610 | Positive | 3636039 - 3636671 | 24371.4 |
| monofunctional biosynthetic peptidoglycan transglycosylase | SK85_03521 | A7ZSA7 | Negative | 3636668 - 3637396 | 27343.1 |
| enhancing lycopene biosynthesis protein 2 | SK85_03522 | P0ABU5 | Negative | 3637393 - 3638046 | 22997.9 |
| aerobic respiration control sensor protein arcb | SK85_03523 | P0AEC3 | Negative | 3638276 - 3640612 | 87988.0 |
| fe-s oxidoreductase | SK85_03524 | P0ADW7 | Negative | 3640708 - 3641637 | 34608.6 |
| glutamate synthase | SK85_03525 | P09831 | Positive | 3642219 - 3646772 | 166733.0 |
| glutamate synthase | SK85_03526 | P09832 | Positive | 3646785 - 3648203 | 52018.3 |
| protein gltf | SK85_03527 | P28721 | Positive | 3648763 - 3649527 | 26353.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





