Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l27 | SK85_03498 | A7ZS81 | Negative | 3620449 - 3620706 | 9125.01 |
| 50s ribosomal protein l21 | SK85_03499 | A7ZS83 | Negative | 3620727 - 3621038 | 11565.0 |
| octaprenyl-diphosphate synthase | SK85_03500 | P0AD57 | Positive | 3621297 - 3622268 | 35219.1 |
| sugar fermentation stimulation protein b | SK85_03501 | P0ACH3 | Positive | 3622496 - 3622774 | 10495.6 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SK85_03502 | A7ZS86 | Negative | 3622822 - 3624081 | 44820.4 |
| transcriptional regulator | SK85_03503 | P0A9W7 | Negative | 3624136 - 3624405 | 10038.0 |
| hypothetical protein | SK85_03504 | P64602 | Negative | 3624550 - 3624843 | 10681.0 |
| abc-type organic solvent transporter | SK85_03505 | P0ADV7 | Negative | 3624843 - 3625478 | 23964.0 |
| abc-type organic solvent transporter | SK85_03506 | P64605 | Negative | 3625497 - 3626048 | 19577.3 |
| toluene abc transporter membrane protein | SK85_03507 | P64608 | Negative | 3626053 - 3626835 | 27865.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





