Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | SK85_03468 | C4ZSP6 | Positive | 3587553 - 3587855 | 11270.6 |
| acyltransferase | SK85_03469 | P63419 | Negative | 3587842 - 3588345 | 18534.8 |
| lipid carrier protein | SK85_03470 | P64601 | Negative | 3588339 - 3588863 | 19673.0 |
| protease | SK85_03471 | P45527 | Positive | 3589072 - 3590067 | 37049.2 |
| peptidase | SK85_03472 | P45475 | Positive | 3590076 - 3590954 | 32537.1 |
| monooxygenase | SK85_03473 | P0ADV6 | Positive | 3591035 - 3592042 | 37131.5 |
| tryptophan-specific transporter | SK85_03474 | P0AAD2 | Negative | 3592160 - 3593404 | 44335.2 |
| atp-dependent rna helicase dead | SK85_03475 | P0A9P7 | Negative | 3593558 - 3595447 | 70550.5 |
| lipoprotein nlpi | SK85_03476 | P0AFB3 | Negative | 3595627 - 3596511 | 33652.6 |
| polyribonucleotide nucleotidyltransferase | SK85_03477 | C4ZSQ5 | Negative | 3596620 - 3598755 | 77105.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





