Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial-like adhesin protein | SK85_03458 | P43319 | Positive | 3578928 - 3580019 | 38537.6 |
| ribosomal rna small subunit methyltransferase i | SK85_03459 | P67088 | Negative | 3580062 - 3580922 | 31349.7 |
| penicillin-binding protein activator lpoa | SK85_03460 | P45464 | Positive | 3580987 - 3583023 | 72829.3 |
| endonuclease | SK85_03461 | C4ZSN9 | Positive | 3582981 - 3583376 | 14798.5 |
| dnaa initiator-associating protein diaa | SK85_03462 | P66818 | Positive | 3583396 - 3583986 | 21107.3 |
| hypothetical protein | SK85_03463 | P64598 | Positive | 3583996 - 3584571 | 20029.1 |
| permease | SK85_03464 | P45468 | Negative | 3584685 - 3585725 | 37286.9 |
| nad-dependent epimerase/dehydratase | SK85_03465 | P45469 | Negative | 3585798 - 3586433 | 23199.3 |
| protein yhbo | SK85_03466 | P45470 | Positive | 3586561 - 3587079 | 18859.4 |
| hypothetical protein | SK85_03467 | B7LH88 | Negative | 3587059 - 3587502 | 16777.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





