Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system n-acetylgalactosamine-specific eiib component | SK85_03448 | P42909 | Positive | 3570442 - 3570918 | 17623.3 |
| n-acetylgalactosamine permease iic component 1 | SK85_03449 | P42910 | Positive | 3570957 - 3571760 | 28646.5 |
| n-acetylgalactosamine-specific enzyme iid component for pts | SK85_03450 | P42911 | Positive | 3571750 - 3572541 | 29003.1 |
| galactosamine-6-phosphate isomerase | SK85_03451 | P42912 | Positive | 3572596 - 3573228 | 23713.2 |
| fimbrial-like adhesin protein | SK85_03452 | P42913 | Positive | 3573699 - 3574283 | 20745.5 |
| periplasmic pilin chaperone | SK85_03453 | P42914 | Positive | 3574363 - 3575058 | 25677.9 |
| hypothetical protein | SK85_03454 | Not Available | Positive | 3575087 - 3576619 | 57713.4 |
| transposase | SK85_03455 | Not Available | Negative | 3576622 - 3577509 | 33651.1 |
| transposase | SK85_03456 | Not Available | Negative | 3577509 - 3577835 | 12644.0 |
| hypothetical protein | SK85_03457 | P42915 | Positive | 3578153 - 3578917 | 27545.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





