Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin yhav | SK85_03438 | P64595 | Positive | 3561304 - 3561768 | 17837.2 |
| dna-binding transcriptional dual regulator | SK85_03439 | P0ACK4 | Negative | 3561823 - 3562632 | 29574.3 |
| d-tagatose-1,6-bisphosphate aldolase subunit kbaz | SK85_03440 | C4ZR44 | Positive | 3562881 - 3564161 | 47195.0 |
| pts system n-acetylgalactosamine-specific eiib component | SK85_03441 | P42904 | Positive | 3564184 - 3564657 | 17086.9 |
| pts system protein | SK85_03442 | P42905 | Positive | 3564668 - 3565447 | 27362.6 |
| pts system n-acetylgalactosamine-specific iid component | SK85_03443 | Not Available | Positive | 3565437 - 3566315 | 31772.6 |
| pts system protein | SK85_03444 | P36881 | Positive | 3566333 - 3566767 | 15513.7 |
| n-acetylglucosamine-6-phosphate deacetylase | SK85_03445 | Q8XAC3 | Positive | 3566764 - 3567897 | 40271.7 |
| tagatose-6-phosphate ketose/aldose isomerase | SK85_03446 | P42907 | Positive | 3568248 - 3569402 | 41784.8 |
| d-tagatose-1,6-bisphosphate aldolase subunit kbay | SK85_03447 | A7ZS33 | Positive | 3569415 - 3570275 | 31295.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





