Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | SK85_03418 | P67661 | Negative | 3537284 - 3538180 | 33258.3 |
| pirin-like protein yhak | SK85_03419 | P42624 | Positive | 3538285 - 3538986 | 25897.0 |
| hypothetical protein | SK85_03420 | P42625 | Positive | 3539009 - 3539173 | 5961.16 |
| hypothetical protein | SK85_03421 | C4ZR24 | Negative | 3539307 - 3540617 | 45363.8 |
| inner membrane transporter yhao | SK85_03422 | P42628 | Negative | 3540645 - 3541976 | 48317.6 |
| l-serine dehydratase tdcg | SK85_03423 | P42630 | Negative | 3542252 - 3543616 | 48524.6 |
| tdcf protein | SK85_03424 | P0AGL3 | Negative | 3543688 - 3544077 | 14008.0 |
| pfl-like enzyme tdce | SK85_03425 | P42632 | Negative | 3544091 - 3546385 | 85940.4 |
| propionate kinase | SK85_03426 | P11868 | Negative | 3546419 - 3547627 | 43386.7 |
| threonine/serine transporter tdcc | SK85_03427 | A7ZS06 | Negative | 3547653 - 3548984 | 48881.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





