Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yqja | SK85_03408 | P0AA65 | Positive | 3531739 - 3532401 | 24587.0 |
| modulator protein mzra | SK85_03409 | P42615 | Positive | 3532405 - 3532788 | 14173.0 |
| protein yqjc | SK85_03410 | P42616 | Positive | 3532935 - 3533303 | 13906.4 |
| hypothetical protein | SK85_03411 | P64583 | Positive | 3533341 - 3533646 | 11052.1 |
| inner membrane protein yqje | SK85_03412 | P64586 | Positive | 3533649 - 3534053 | 15148.0 |
| hypothetical protein | SK85_03413 | Q47710 | Positive | 3534043 - 3534342 | 11871.5 |
| inner membrane protein yqjf | SK85_03414 | P42619 | Positive | 3534438 - 3534920 | 17216.6 |
| glutathionyl-hydroquinone reductase yqjg | SK85_03415 | P42620 | Positive | 3534990 - 3535976 | 37388.0 |
| inner membrane protein yhah | SK85_03416 | P64591 | Positive | 3536270 - 3536635 | 14281.7 |
| inner membrane protein yhai | SK85_03417 | P64593 | Positive | 3536877 - 3537233 | 13456.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





