Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s21 | SK85_03378 | A8APV6 | Positive | 3494747 - 3494962 | 8500.42 |
| dna primase | SK85_03379 | P0ABS6 | Positive | 3495073 - 3496818 | 65568.5 |
| rna polymerase sigma factor rpod | SK85_03380 | P00579 | Positive | 3497013 - 3498854 | 70241.3 |
| g/u mismatch-specific dna glycosylase | SK85_03381 | B7MB04 | Negative | 3498933 - 3499439 | 18674.5 |
| Trna-met | Not Available | Not Available | Positive | 3499564 - 3499639 | Not Available |
| nadph-dependent ferric-chelate reductase | SK85_03383 | Q46871 | Negative | 3499693 - 3500457 | 28873.1 |
| transcriptional regulator yqji | SK85_03384 | P64588 | Positive | 3500745 - 3501368 | 23402.7 |
| aerotaxis receptor | SK85_03385 | P50466 | Negative | 3501522 - 3503042 | 55069.0 |
| putrescine aminotransferase | SK85_03386 | C4ZQY9 | Positive | 3503349 - 3504839 | 53943.5 |
| trna-binding protein ygjh | SK85_03387 | P42589 | Negative | 3504881 - 3505213 | 12316.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





