Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sh3 domain-containing protein | SK85_03368 | P0ADU0 | Positive | 3485173 - 3485793 | 23077.7 |
| multifunctional cca protein | SK85_03369 | C4ZQX3 | Positive | 3485857 - 3487095 | 46469.8 |
| undecaprenyl-diphosphatase | SK85_03370 | P60933 | Negative | 3487276 - 3488097 | 29760.6 |
| dihydroneopterin aldolase | SK85_03371 | P0AC17 | Negative | 3488187 - 3488555 | 13620.2 |
| glycerol-3-phosphate acyltransferase | SK85_03372 | A7ZRU0 | Positive | 3488660 - 3489277 | 22194.7 |
| hth-type transcriptional activator ttdr | SK85_03373 | P45463 | Negative | 3489290 - 3490222 | 35316.6 |
| l(+)-tartrate dehydratase subunit alpha | SK85_03374 | Q0TD45 | Positive | 3490432 - 3491340 | 32604.3 |
| l(+)-tartrate dehydratase subunit beta | SK85_03375 | Q0TD44 | Positive | 3491337 - 3491942 | 22679.8 |
| l-tartrate/succinate antiporter | SK85_03376 | P39414 | Positive | 3491990 - 3493453 | 52909.5 |
| trna n6-adenosine threonylcarbamoyltransferase | SK85_03377 | C4ZQY1 | Negative | 3493496 - 3494509 | 36010.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





